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Omics Data Automation omics data based complex trait analysis software
Omics Data Based Complex Trait Analysis Software, supplied by Omics Data Automation, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/omics-data-based+complex+trait+analysis+software/analysis+based+complex+data+omics+trait/bio_rxiv__64898__2026__02__19__706772-54-17-17
Average 86 stars, based on 1 article reviews
omics data based complex trait analysis software - by Bioz Stars, 2026-09
86/100 stars

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Software:

Article Title: Divergent Flowering Time Responses to Increasing Temperatures Are Associated With Transcriptome Plasticity and Epigenetic Modification Differences at FLC Promoter Region of Arabidopsis thaliana.
Article Snippet: Understanding the genetic, and transcriptomic changes that drive the phenotypic plasticity of fitness traits is a central question in evolutionary biology.. In this study, we utilised 152 natural Swedish Arabidopsis thaliana accessions with resequenced genomes, transcriptomes and methylomes and measured flowering times (FTs) under two temperature conditions (10°C and 16°C) to address this question.. We revealed that the northern accessions exhibited advanced flowering in response to decreased temperature, whereas the southern accessions delayed their flowering, indicating a divergent flowering response.

Article Title: Identification of influential probe types in epigenetic predictions of human traits: implications for microarray design
Article Snippet: For this, we used OmicS-data-based complex trait analysis (OSCA) software in which the correlation structure among all input probes is used to create an omic-data-based relationship matrix (ORM).

Article Title: Abstracts from the 52nd European Society of Human Genetics (ESHG) Conference: Posters
Article Snippet: Here we applied the OmicS-data-based Complex trait Analysis (OSCA) software to new ALS (782 cases and 613 controls).

Expressing:

Article Title: Divergent Flowering Time Responses to Increasing Temperatures Are Associated With Transcriptome Plasticity and Epigenetic Modification Differences at FLC Promoter Region of Arabidopsis thaliana.
Article Snippet: Understanding the genetic, and transcriptomic changes that drive the phenotypic plasticity of fitness traits is a central question in evolutionary biology.. In this study, we utilised 152 natural Swedish Arabidopsis thaliana accessions with resequenced genomes, transcriptomes and methylomes and measured flowering times (FTs) under two temperature conditions (10°C and 16°C) to address this question.. We revealed that the northern accessions exhibited advanced flowering in response to decreased temperature, whereas the southern accessions delayed their flowering, indicating a divergent flowering response.

Article Title: Identification of influential probe types in epigenetic predictions of human traits: implications for microarray design
Article Snippet: For this, we used OmicS-data-based complex trait analysis (OSCA) software in which the correlation structure among all input probes is used to create an omic-data-based relationship matrix (ORM).

Article Title: Abstracts from the 52nd European Society of Human Genetics (ESHG) Conference: Posters
Article Snippet: Here we applied the OmicS-data-based Complex trait Analysis (OSCA) software to new ALS (782 cases and 613 controls).

Derivative Assay:

Article Title: Divergent Flowering Time Responses to Increasing Temperatures Are Associated With Transcriptome Plasticity and Epigenetic Modification Differences at FLC Promoter Region of Arabidopsis thaliana.
Article Snippet: Understanding the genetic, and transcriptomic changes that drive the phenotypic plasticity of fitness traits is a central question in evolutionary biology.. In this study, we utilised 152 natural Swedish Arabidopsis thaliana accessions with resequenced genomes, transcriptomes and methylomes and measured flowering times (FTs) under two temperature conditions (10°C and 16°C) to address this question.. We revealed that the northern accessions exhibited advanced flowering in response to decreased temperature, whereas the southern accessions delayed their flowering, indicating a divergent flowering response.

Article Title: Identification of influential probe types in epigenetic predictions of human traits: implications for microarray design
Article Snippet: For this, we used OmicS-data-based complex trait analysis (OSCA) software in which the correlation structure among all input probes is used to create an omic-data-based relationship matrix (ORM).

Article Title: Abstracts from the 52nd European Society of Human Genetics (ESHG) Conference: Posters
Article Snippet: Here we applied the OmicS-data-based Complex trait Analysis (OSCA) software to new ALS (782 cases and 613 controls).

Selection:

Article Title: Divergent Flowering Time Responses to Increasing Temperatures Are Associated With Transcriptome Plasticity and Epigenetic Modification Differences at FLC Promoter Region of Arabidopsis thaliana.
Article Snippet: Understanding the genetic, and transcriptomic changes that drive the phenotypic plasticity of fitness traits is a central question in evolutionary biology.. In this study, we utilised 152 natural Swedish Arabidopsis thaliana accessions with resequenced genomes, transcriptomes and methylomes and measured flowering times (FTs) under two temperature conditions (10°C and 16°C) to address this question.. We revealed that the northern accessions exhibited advanced flowering in response to decreased temperature, whereas the southern accessions delayed their flowering, indicating a divergent flowering response.

Article Title: Identification of influential probe types in epigenetic predictions of human traits: implications for microarray design
Article Snippet: For this, we used OmicS-data-based complex trait analysis (OSCA) software in which the correlation structure among all input probes is used to create an omic-data-based relationship matrix (ORM).

Article Title: Abstracts from the 52nd European Society of Human Genetics (ESHG) Conference: Posters
Article Snippet: Here we applied the OmicS-data-based Complex trait Analysis (OSCA) software to new ALS (782 cases and 613 controls).

Control:

Article Title: Divergent Flowering Time Responses to Increasing Temperatures Are Associated With Transcriptome Plasticity and Epigenetic Modification Differences at FLC Promoter Region of Arabidopsis thaliana.
Article Snippet: Understanding the genetic, and transcriptomic changes that drive the phenotypic plasticity of fitness traits is a central question in evolutionary biology.. In this study, we utilised 152 natural Swedish Arabidopsis thaliana accessions with resequenced genomes, transcriptomes and methylomes and measured flowering times (FTs) under two temperature conditions (10°C and 16°C) to address this question.. We revealed that the northern accessions exhibited advanced flowering in response to decreased temperature, whereas the southern accessions delayed their flowering, indicating a divergent flowering response.

Article Title: Identification of influential probe types in epigenetic predictions of human traits: implications for microarray design
Article Snippet: For this, we used OmicS-data-based complex trait analysis (OSCA) software in which the correlation structure among all input probes is used to create an omic-data-based relationship matrix (ORM).

Article Title: Abstracts from the 52nd European Society of Human Genetics (ESHG) Conference: Posters
Article Snippet: Here we applied the OmicS-data-based Complex trait Analysis (OSCA) software to new ALS (782 cases and 613 controls).

DNA Methylation Assay:

Article Title: Divergent Flowering Time Responses to Increasing Temperatures Are Associated With Transcriptome Plasticity and Epigenetic Modification Differences at FLC Promoter Region of Arabidopsis thaliana.
Article Snippet: Understanding the genetic, and transcriptomic changes that drive the phenotypic plasticity of fitness traits is a central question in evolutionary biology.. In this study, we utilised 152 natural Swedish Arabidopsis thaliana accessions with resequenced genomes, transcriptomes and methylomes and measured flowering times (FTs) under two temperature conditions (10°C and 16°C) to address this question.. We revealed that the northern accessions exhibited advanced flowering in response to decreased temperature, whereas the southern accessions delayed their flowering, indicating a divergent flowering response.

Article Title: Identification of influential probe types in epigenetic predictions of human traits: implications for microarray design
Article Snippet: For this, we used OmicS-data-based complex trait analysis (OSCA) software in which the correlation structure among all input probes is used to create an omic-data-based relationship matrix (ORM).

Article Title: Abstracts from the 52nd European Society of Human Genetics (ESHG) Conference: Posters
Article Snippet: Here we applied the OmicS-data-based Complex trait Analysis (OSCA) software to new ALS (782 cases and 613 controls).

Methylation:

Article Title: Divergent Flowering Time Responses to Increasing Temperatures Are Associated With Transcriptome Plasticity and Epigenetic Modification Differences at FLC Promoter Region of Arabidopsis thaliana.
Article Snippet: Understanding the genetic, and transcriptomic changes that drive the phenotypic plasticity of fitness traits is a central question in evolutionary biology.. In this study, we utilised 152 natural Swedish Arabidopsis thaliana accessions with resequenced genomes, transcriptomes and methylomes and measured flowering times (FTs) under two temperature conditions (10°C and 16°C) to address this question.. We revealed that the northern accessions exhibited advanced flowering in response to decreased temperature, whereas the southern accessions delayed their flowering, indicating a divergent flowering response.

Article Title: Identification of influential probe types in epigenetic predictions of human traits: implications for microarray design
Article Snippet: For this, we used OmicS-data-based complex trait analysis (OSCA) software in which the correlation structure among all input probes is used to create an omic-data-based relationship matrix (ORM).

Article Title: Abstracts from the 52nd European Society of Human Genetics (ESHG) Conference: Posters
Article Snippet: Here we applied the OmicS-data-based Complex trait Analysis (OSCA) software to new ALS (782 cases and 613 controls).



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Miami plot of the observed P -values of each CpG site for an association with preterm birth. Log 10 P -values are shown <t>for</t> <t>MWAS</t> 1 and −log 10 P -values are shown for MWAS 2. The dotted lines indicate methylome-wide significance ( P = 7.01 × 10 −8 ). The annotation of genes for significant sites is reported by missMethyl for MWAS 1 and by <t>OSCA</t> for MWAS 2.
Software Tool Omics Data Based Complex Trait Analysis (Osca), supplied by Omics Data Automation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
software tool omics-data-based complex trait analysis (osca) - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

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Miami plot of the observed P -values of each CpG site for an association with preterm birth. Log 10 P -values are shown for MWAS 1 and −log 10 P -values are shown for MWAS 2. The dotted lines indicate methylome-wide significance ( P = 7.01 × 10 −8 ). The annotation of genes for significant sites is reported by missMethyl for MWAS 1 and by OSCA for MWAS 2.

Journal: Human Molecular Genetics

Article Title: Methylome-wide association study of early life stressors and adult mental health

doi: 10.1093/hmg/ddab274

Figure Lengend Snippet: Miami plot of the observed P -values of each CpG site for an association with preterm birth. Log 10 P -values are shown for MWAS 1 and −log 10 P -values are shown for MWAS 2. The dotted lines indicate methylome-wide significance ( P = 7.01 × 10 −8 ). The annotation of genes for significant sites is reported by missMethyl for MWAS 1 and by OSCA for MWAS 2.

Article Snippet: MWAS 2 was conducted using the software tool OmicS-data-based Complex trait Analysis (OSCA) ( ).

Techniques: